Source code for molsysmt.form.file_h5.to_mdtraj_Trajectory

from molsysmt._private.digestion import digest


[docs]
@digest(form='file:h5')
def to_mdtraj_Trajectory(item, atom_indices='all', structure_indices='all', skip_digestion=False):

    from . import to_mdtraj_HDF5TrajectoryFile
    from .mdtraj_HDF5TrajectoryFile import to_mdtraj_Trajectory as mdtraj_HDF5TrajectoryFile_to_mdtraj_Trajectory

    tmp_item = to_mdtraj_HDF5TrajectoryFile(item, skip_digestion=True)
    tmp_item = mdtraj_HDF5TrajectoryFile_to_mdtraj_Trajectory(tmp_item, atom_indices=atom_indices, structure_indices=structure_indices,
            skip_digestion=True)

    return tmp_item