API Amino Acid#

get_1_letter_code_from_name(name)

Return the one-letter IUPAC code for an amino acid given its three-letter or variant name.

get_bonded_atom_pairs(group_name, atom_names)

Getting standard intra-group covalent bonded atom pairs for amino acid residues.

get_expected_heavy_atoms(group_name[, ...])

Return the set of expected heavy (non-hydrogen) atom names for a residue.

get_expected_hydrogens(group_name[, ...])

Return the list of expected hydrogen atom names for a residue.

get_group_db(group_name)

Getting the internal reference database dictionary for amino acid groups.

get_standard_name(group_name)

Return the canonical standard amino-acid name for a non-standard residue.

is_amino_acid(name)

Check whether a group name corresponds to an amino acid residue.