molsysmt.third_party.nglview.add_hbonds

molsysmt.third_party.nglview.add_hbonds(view, hbonds, selection=None, selection_2=None, hbond_level='atom', color='#FFC300', radius='0.1 angstroms', syntax='MolSysMT')

Adding hydrogen bond interaction cylinders in NGLWidget.

Parameters:

• view (nglview.NGLWidget) – Target molecular viewer instance.

• hbonds (object) – Argument hbonds.

• selection (str, list, tuple, or numpy.ndarray, default=None) – Selection string or boolean/integer array specifying elements.

• selection_2 (str, list, tuple, or numpy.ndarray, default=None) – Second selection string or boolean/integer array.

• hbond_level (object, default='atom') – Hydrogen bond element level representation.

• color (object, default='#FFC300') – Argument color.

• radius (object, default='0.1 angstroms') – Argument radius.

• syntax (str, default='MolSysMT') – Selection syntax used to evaluate selection (e.g., ‘MolSysMT’, ‘MDTraj’).

• versionadded: (..) – 1.0.0: