API Topology

get_bondgraph(molecular_system[, ...])	Building a bond graph from a molecular system.
get_covalent_blocks(molecular_system[, ...])	Identifying the sets of atoms that remain covalently connected when bonds are removed.
get_dihedral_quartets(molecular_system[, ...])	Finding atom quartets that define standard dihedral angles.
get_sequence_alignment(molecular_system[, ...])	Aligning sequences between a query and reference molecular system.
get_sequence_identity(molecular_system[, ...])	Calculating sequence identity between two molecular systems.