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MolSysViewer 0.7.0 documentation - Home MolSysViewer 0.7.0 documentation - Home
  • About
  • Showcase
  • User guide
  • Developer guide
  • API Reference
  • AI Assistant
  • GitHub
  • About
  • Showcase
  • User guide
  • Developer guide
  • API Reference
  • AI Assistant
  • GitHub

Section Navigation

Getting started

  • Getting started
    • Contributing (quick start)
  • Developer setup
  • Repository structure
  • Configuration (Python)
  • Demo systems
  • Contributing
  • CI and automation

Architecture

  • MolSysViewer Concepts (Python ↔ AnyWidget ↔ Mol* ↔ WebGL)
  • Public API and stability
  • Protocol and payloads (Python ↔ TypeScript)
  • Architecture
  • Architecture (full)
  • Regions and layers
  • Debugging

Workflow

  • JS/TS workflow
  • Testing & QA
  • Warnings (planned)
  • Releasing and publishing

Documentation

  • Documentation
  • Docs workflow (local build and RTD parity)
  • Documentation for the web
    • Web documentation editorial guidelines
    • Web docs build & layout
    • MyST in MolSysViewer documentation
    • References and Cross-links in Documentation
  • API documentation guidelines
    • Docstrings
    • Doctests

Style

  • Coding style & conventions
  • Type annotations (Python ≥3.10)
  • String and quotation style

Planning and history

  • Roadmap
  • Changes notes
  • Future (index)
    • CI roadmap (future)
    • Performance notes (future)
    • Security (future)
  • Appendix
    • Historical documents
      • Architecture snapshot (2025-11)
      • Design overview (historical)
      • Modules overview (snapshot)
  • Developer guide
  • Future (index)

Future (index)#

Use this section for developer notes that are not stable yet. When an item becomes stable, promote it into Roadmap or the relevant “current” page.

  • CI roadmap (future)
  • Performance notes (future)
  • Security (future)

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Changes notes

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CI roadmap (future)
© 2026, Liliana M. Moreno Vargas, Diego Prada Gracia and contributors | UIBCDF Lab at the Federico Gómez Children’s Hospital of Mexico
MolSysViewer is an open source project shared under an MIT license with a structure based on the Computational Molecular Science Python Cookiecutter version 1.5

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