Third Party

MolSysMT provides specialized interoperability bridges, custom simulation forces, hardware platform diagnostics, and advanced 3D visualizers for third-party molecular modeling packages.

Package / Ecosystem	Description
NGLView	Interoperability bridges, custom visualizers, geometric shapes, and contact/hbond renderers for NGLView
OpenMM	Custom external forces, custom trajectory reporters, and platform bridges for OpenMM
tLEaP	AmberTools tLEaP automation and isolated script execution wrapper