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MolSysViewer 0.7.0 documentation - Home MolSysViewer 0.7.0 documentation - Home
  • About
  • Showcase
  • User guide
  • Developer guide
  • API Reference
  • MolSys-AI
  • GitHub
  • About
  • Showcase
  • User guide
  • Developer guide
  • API Reference
  • MolSys-AI
  • GitHub

Section Navigation

  • Introduction
    • What is MolSysViewer?
    • Installation
    • MolSysMT
    • Mol*
    • Units
    • Customization
  • Molecular system
    • A molecular system in MolSysMT
    • Loading and inspection
    • Topology
    • Structures
    • Quick info
    • Selecting elements
    • Getting attributes
    • Setting attributes
    • Removing elements and structures
    • Adding elements
    • Appending structures
  • Viewer
    • Viewer UI
    • Camera and controls
  • Scene management
    • Visibility
    • Atom masking
    • Whole
    • Regions
    • Layers
    • Tags
    • Reset & cleanup
  • Representations
    • Representation types
    • Presets
    • User presets
  • Overlays
    • Shapes
      • Spheres
      • Pockets (surfaces and blobs)
      • Channels (tubes)
      • Pharmacophore overlays
      • Anisotropy (ellipsoids/disks)
      • Links (networks)
      • Displacement vectors
      • Mesh primitives
    • Labels
  • Export & embedding
    • HTML Export
    • Sphinx HTML Embedding
  • Demo systems
    • Demo catalog
  • Troubleshooting
    • Viewer not loading
    • Docs embeds (HTML lite)
    • Selection issues
    • Performance
  • Cookbook
    • Pocket surface from alpha-spheres
    • Pocket blob (Gaussian field)
    • Channel tube
    • Pharmacophore overlay
    • Anisotropy ellipsoids/disks
    • HTML Export
    • Sphinx HTML Embedding
  • User guide

User guide#

Welcome to MolSysViewer.

If you are new here, start with Installation and What is MolSysViewer?.

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Anisotropy ellipsoids/disks

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Introduction
© 2026, Liliana M. Moreno Vargas, Diego Prada Gracia and contributors | UIBCDF Lab at the Federico Gómez Children’s Hospital of Mexico
MolSysViewer is an open source project shared under an MIT license with a structure based on the Computational Molecular Science Python Cookiecutter version 1.5

Created using Sphinx 8.2.3 | Built with the PyData Sphinx Theme 0.16.1

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