PDBStructure#

Form adapter and capabilities for biopython.PDBStructure.

  • Technical Form Name: biopython.PDBStructure

  • Form Type: class

Added in version 1.0.0.

API documentation

  • Form adapter module: molsysmt.form.biopython_PDBStructure

Overview#

biopython.PDBStructure is a supported representation form in MolSysMT. Form adapter and capabilities for biopython.PDBStructure.

Supported attributes#

The biopython.PDBStructure form container supports a total of 0 attributes:

Category

Subcategory / Level

Supported Attributes

—

—

No direct attributes exposed

Implemented operations#

The form adapter module molsysmt.form.biopython_PDBStructure implements the following functions and modules:

Function / Module

Description

get_structural_attributes

Module containing getters for structural attributes.

has_attribute()

Checks whether a specific attribute name is supported by biopython.PDBStructure.

is_form()

Returns True if the provided object is an instance of biopython.PDBStructure.

Note

Each form adapter in MolSysMT implements only the specific functions that are meaningful for its data model.

Supported conversions#

The following table lists all direct conversion functions implemented in molsysmt.form.biopython_PDBStructure:

Target Form

Form Type

API Documentation

molsysmt.MolSys

class

to_molsysmt_MolSys()

molsysmt.Structures

class

to_molsysmt_Structures()

molsysmt.Topology

class

to_molsysmt_Topology()

See also

Foundations & Object Architecture:

  • The Molecular System: The fundamental definition of a molecular system, forms, and attributes in MolSysMT.

  • MolSys: In-depth architectural guide on the native molsysmt.MolSys container.

  • Topology: Architectural specification of the native Topology object.

  • Structures: Architectural specification of the native Structures object.

Form Tools & Conversions: