String Forms#

In-memory text, sequence, SMILES, and database identifier forms supported by MolSysMT.

Form

Description

alphafold_id

AlphaFold DB identifier string

amino_acids_1

One-letter amino acid sequence string

amino_acids_3

Three-letter amino acid sequence string

pdb_id

Protein Data Bank (PDB) 4-character identifier string

pdb_text

PDB-formatted text buffer string in memory

smiles

SMILES chemical structure specification string

uniprot_id

UniProt database accession identifier string