Periodic boundary conditions#

Get angles from box

Getting the angles of a PBC box

Get box from lengths and angles

Getting the PBC box defined by its lengths and angles

Get lengths and angles from box

Getting the lengths and angles of a PBC box

Get lengths from box

Getting the lengths of a PBC box

Get shape from box

Getting the shape of a PBC box

Get shape from angles

Getting the shape of a PBC box defined by its angles

Get volume from box

Getting the volume of a PBC box

Get volume from lengths and angles

Getting the volume of a PBC box defined by its lengths and angles

Has PBC

Checking if a molecular system has PBC

Unwrap

Unwrapping the coordinates of the trajectory of a molecular system with PBC to evolve beyond the triclinic unit cell

Wrap to MIC

Wrapping the coordinates of the trajectory of a molecular system with PBC to evolve inside the Minimum Image Convention (MIC) to a specific point

Wrap to PBC

Wrapping the coordinates of the trajectory of a molecular system with PBC to evolve inside the triclinic unit cell