Add hbonds#
import molsysmt as msm
import numpy as np
from molsysmt import pyunitwizard as puw
molsys = msm.convert(msm.systems['Barnase-Barstar']['barnase_barstar.h5msm'])
hbonds, distance, angles = msm.hbonds.get_luzard_chandler_hbonds(molsys, selection='molecule_name=="BARNASE"',
selection_2='molecule_name=="BARSTAR"')
view = msm.view(molsys)
msm.thirds.nglview.add_hbonds(view, hbonds[0])
view
view._ngl_msg_archive[-len(hbonds[0]):]
view = msm.view(molsys)
msm.thirds.nglview.add_hbonds(view, hbonds, hbond_level='group')
view
view._ngl_msg_archive[-1]