MDAnalysis.Universe#

add(to_item, item[, atom_indices, ...])

append_structures(item[, structure_id, ...])

copy(item)

extract(item[, atom_indices, ...])

has_attribute(molecular_system, attribute[, ...])

is_form(item)

StructuresIterator(molecular_system[, ...])

Iterating over Universe structures without changing its active frame.

TopologyIterator(molecular_system[, ...])

Iterating over Universe topology through the canonical native seam.

merge(items[, atom_indices, ...])

set

to_file_pdb

to_mdtraj_Trajectory

to_molsysmt_MolSys

to_molsysmt_Structures

to_molsysmt_Topology

to_nglview_NGLWidget