molsysmt.thirds.openmm package

Subpackages

• molsysmt.thirds.openmm.forces package
  • Submodules
  • molsysmt.thirds.openmm.forces.add_allowed_plane_region module
    • add_allowed_plane_region()
  • molsysmt.thirds.openmm.forces.add_allowed_z_region module
    • add_allowed_z_region()
  • molsysmt.thirds.openmm.forces.add_constant_force module
    • add_constant_force()
  • molsysmt.thirds.openmm.forces.add_forbidden_plane_region module
    • add_forbidden_plane_region()
  • molsysmt.thirds.openmm.forces.add_forbidden_z_region module
    • add_forbidden_z_region()
  • molsysmt.thirds.openmm.forces.add_harmonic_bond_force module
    • add_harmonic_bond_force()
  • molsysmt.thirds.openmm.forces.add_plane_harmonic_restraint module
    • add_plane_harmonic_restraint()
  • molsysmt.thirds.openmm.forces.add_point_harmonic_restraint module
    • add_point_harmonic_restraint()
  • molsysmt.thirds.openmm.forces.pin_atoms module
    • pin_atoms()
  • Module contents
• molsysmt.thirds.openmm.platforms package
  • Submodules
  • molsysmt.thirds.openmm.platforms.platforms module
    • available_platforms()
    • loading_failures()
  • Module contents
• molsysmt.thirds.openmm.reporters package
  • Submodules
  • molsysmt.thirds.openmm.reporters.MolSys module
    • MolSysReporter
      • MolSysReporter.end()
      • MolSysReporter.report()
  • molsysmt.thirds.openmm.reporters.StructuresDict module
    • StructuresDictReporter
      • StructuresDictReporter.describeNextReport()
      • StructuresDictReporter.finalize()
      • StructuresDictReporter.report()
  • molsysmt.thirds.openmm.reporters.h5msm module
    • H5MSMReporter
      • H5MSMReporter.close()
      • H5MSMReporter.describeNextReport()
      • H5MSMReporter.report()
  • molsysmt.thirds.openmm.reporters.tqdm module
    • TQDMReporter
      • TQDMReporter.describeNextReport()
      • TQDMReporter.finalize()
      • TQDMReporter.report()
  • Module contents

Module contents