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API Basic
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API Topology
API Structure
API Periodic Boundary Conditions
API Physical and chemical properties
API Molecular mechanics
API Hbonds
API Element
API Atom
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API Amino acid
API Ion
API Lipid
API Nucleotide
API Saccharide
API Small Molecule
API Terminal Capping
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API Component
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Form
biopython.Seq
biopython.SeqRecord
file:bcif
file:bcif.gz
file:cif
file:crd
file:dcd
file:gro
file:h5
file:h5msm
file:inpcrd
file:mmtf
file:mol2
file:msmpk
file:pdb
file:prmtop
file:psf
file:trjpk
file:xtc
file:xyznpy
MDAnalysis.Topology
MDAnalysis.Universe
mdtraj.DCDTrajectoryFile
mdtraj.HDF5TrajectoryFile
mdtraj.Topology
mdtraj.Trajectory
mdtraj.XTCTrajectoryFile
mmcif.PdbxContainers.DataContainer
mmtf.MMTFDecoder
molsysmt.CIFFileHandler
molsysmt.GROFileHandler
molsysmt.H5MSMFileHandler
molsysmt.MolecularMechanics
molsysmt.MolecularMechanicsDict
molsysmt.MolSys
molsysmt.PDBFileHandler
molsysmt.Structures
molsysmt.Structures
molsysmt.Topology
networkx.Graph
nglview_NGLWidget
openmm.AmberInpcrdFile
openmm.AmberPrmtopFile
openmm.CharmmCrdFile
openmm.CharmmPsfFile
openmm.Context
openmm.GromacsGroFile
openmm.GromacsGroFile
openmm.Modeller
openmm.PDBFile
openmm.Simulation
openmm.State
openmm.System
openmm.Topology
parmed.Structure
pdbfixer.PDBFixer
pytraj.Topology
pytraj.Trajectory
strubg:alphafold_id
string:aminoacids1
string:aminoacids3
string:pdb_id
string:pdb_text
XYZ
Thirds
API NGLView
OpenMM
API Forces
API Forces
API Forces
Developer
_private
Exceptions
API documentation
Form
openmm.Context
molsysmt.form.openmm_Context.copy
molsysmt.form.openmm_Context.copy
#
molsysmt.form.openmm_Context.
copy
(
item
)
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#
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