Path D - Module 34: Comparison & Superposition

Align the channel tetramer to a reference to see how much it deviates from the crystal structure. In this module, you will learn to perform high-symmetry superpositions.

import molsysmt as msm
m1 = msm.convert('pdb:1K4C', to_form='molsysmt.MolSys')
m2 = msm.copy(m1)
rmsd = msm.structure.least_rmsd_align(m1, m2)