File Handlers

Native I/O handler classes engineered for streaming, record-level parsing, and binary dataset management.

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Contents

• PDBFileHandler
  Low-level parser and stream handler for Protein Data Bank (.pdb) files.

• H5MSMFileHandler
  Binary HDF5 handle manager for .h5msm native files and trajectory chunking.

• GROFileHandler
  Fixed-column text stream parser for Gromacs GRO (.gro) files.

• CIFFileHandler
  Category loop block parser for mmCIF (.cif) macromolecular structures.